Info

General info:

  • Differential expression analysis using limma/voom
  • Some values have been rounded

Datasets analysed:

  • transcript rnaseq: TRUE
  • gene rnaseq: TRUE

Treatment comparisons:

  • treatment1 - treatment2

Total number of samples: 4

Number of samples in each treatment group:

  • treatment1: 2
  • treatment2: 2

Volcano plots

These plots plot the negative log of the p-value against the log fold change. Genes/transcripts with a p-value smaller than 0.1 and a log fold change greater/smaller than +- log2(1.1) are plotted here.

Blue: Genes/transcripts with an adjusted p-value smaller than 0.1 and a log fold change greater/smaller than +-log2(1.1)

Red: Genes/transcripts with an adjusted p-value smaller than 0.1 and a log fold change greater/smaller than +-log2(1.1)

Yellow: Genes/transcripts with an adjusted p-value smaller than 0.05 and a log fold change greater/smaller than +-log2(1.1)

Green: Genes/transcripts with an adjusted p-value smaller than 0.01 and a log fold change greater/smaller than +-log2(1.1)

treatment1 - treatment2

transcript’s (rnaseq)

gene’s (rnaseq)

 

Generated by ESR Genomics

www.esr.cri.nz